Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&ACCCAGAAGGCAGAGCTTGCAGTGA
(((((((((((((((((((...&))))))))))..))))...))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001099294
GeneSymbolSHISAL1
Binding site5106,5131
Score0.846
Seed1
Au0.485
Energy-26.6
Binding len25
Me-3.938
Phylopstem-0.4260248749999999
Phylopflank-0.49830647499999997
Longest consecutive pairings10
Position of longest consecutive pairings15
Pairings in 3prime end5
Position3UTR
2D Structure