Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TGTACCCAGGGCCCATCTGGGAGCCAT
...(((((((((((((((((.(&).))))))))).......)))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001099294
GeneSymbolSHISAL1
Binding site5776,5803
Score0.923
Seed0
Au0.412
Energy-25.8
Binding len27
Me-6.515
Phylopstem2.405208333333333
Phylopflank0.6761416712500001
Longest consecutive pairings9
Position of longest consecutive pairings16
Pairings in 3prime end7
Position3UTR
2D Structure