Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TCTAGACTCAGAGAAGCTGGG
..((((((..((((((((((((&)))..))))))))))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001099334
GeneSymbolC2orf80
Binding site80,101
Score0.846
Seed1
Au0.485
Energy-17.6
Binding len21
Me-7.256
Phylopstem0.5917501142857143
Phylopflank0.19260150292500006
Longest consecutive pairings15
Position of longest consecutive pairings1
Pairings in 3prime end8
Position5UTR
2D Structure