Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&GCGCGGGCGGGGGCCAGG
..(((((((((.((((.((...&)).)))).))))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001099403
GeneSymbolPRDM8
Binding site1716,1734
Score0.923
Seed1
Au0.132
Energy-25.4
Binding len18
Me-8.304
Phylopstem0.7812045555555556
Phylopflank1.3566599850000005
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end4
PositionCDS
2D Structure