Details of Duplex


2D Structure dot-bracket from RNAduplex"
AGACCCTGCAGCCTTCCCACC&GGTGGGAGGCACGCTGGACGCTGAGAGGGA
...((((.(((((((((((((&)))))))))..........))))..)))).
Details
MiRNAhsa-miR-4725-5p
RefseqIDNM_001099433
GeneSymbolJAKMIP1
Binding site1967,1997
Score0.846
Seed0
Au0.309
Energy-25.8
Binding len30
Me-8.828
Phylopstem3.3431521804347826
Phylopflank3.4459418787500002
Longest consecutive pairings9
Position of longest consecutive pairings21
Pairings in 3prime end8
PositionCDS
2D Structure