Details of Duplex


2D Structure dot-bracket from RNAduplex"
AGACCCTGCAGCCTTCCCACC&GGTGGGAGGAGGGTAAGGGA
...((((....((((((((((&))))))))).)....)))).
Details
MiRNAhsa-miR-4725-5p
RefseqIDNM_001099455
GeneSymbolCPPED1
Binding site2970,2990
Score0.962
Seed0
Au0.5
Energy-23.5
Binding len20
Me-13.952
Phylopstem0.2922549090909091
Phylopflank0.2175437
Longest consecutive pairings9
Position of longest consecutive pairings11
Pairings in 3prime end8
Position3UTR
2D Structure