Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TGCAATATGTCAGGTG
((((((((((...((((.....&)))).)))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001099650
GeneSymbolGXYLT1
Binding site5766,5782
Score0.846
Seed1
Au0.588
Energy-16.5
Binding len16
Me-11.398
Phylopstem0.7445645510000001
Phylopflank0.8150543106250001
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end3
Position3UTR
2D Structure