Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&CTGCAGGGATCGGAAGCCGGTT
.(((((((((..(((..((((.&))))..)))..))).)))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001099669
GeneSymbolHIGD1A
Binding site6,28
Score0.846
Seed1
Au0.404
Energy-21.6
Binding len22
Me-10.198
Phylopstem-0.09456697000000003
Phylopflank0.2606995405357143
Longest consecutive pairings6
Position of longest consecutive pairings1
Pairings in 3prime end5
Position5UTR
2D Structure