Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TCTGACTCAGAAGATGAAGCTAGTGT
(((((((((.((((((((((((&)))).))))))))..)).))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001099678
GeneSymbolLRRC58
Binding site1164,1190
Score0.846
Seed1
Au0.544
Energy-22.5
Binding len26
Me-5.18
Phylopstem-0.4555515076923076
Phylopflank0.20503527250000003
Longest consecutive pairings8
Position of longest consecutive pairings13
Pairings in 3prime end8
PositionCDS
2D Structure