Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&GCCCAGTTGGCACTCAAAGAAGCCAGG
..((((((.((((((((((...&)))))).........)))).)))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001099756
GeneSymbolSYBU
Binding site1200,1227
Score0.923
Seed1
Au0.5
Energy-21.4
Binding len27
Me-6.013
Phylopstem1.460966710526316
Phylopflank1.3908060612499997
Longest consecutive pairings6
Position of longest consecutive pairings21
Pairings in 3prime end5
PositionCDS
2D Structure