Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&ACCTCGGCTGAAAAGAAGAAGCCAGTGT
((((((((.((((((((((...&))).))).......)))).)))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001099783
GeneSymbolC4orf33
Binding site13,41
Score0.846
Seed1
Au0.515
Energy-20.5
Binding len28
Me-4.994
Phylopstem-1.070993472777778
Phylopflank0.2578707364166667
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end5
Position5UTR
2D Structure