Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&CTGCCCAGGGAGCTC
....((((((...((((((((.&)))))))))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001099790
GeneSymbolPRAMEF19
Binding site137,152
Score0.846
Seed0
Au0.368
Energy-23.5
Binding len15
Me-17.007
Phylopstem-0.335554475
Phylopflank-0.28614414750000006
Longest consecutive pairings14
Position of longest consecutive pairings1
Pairings in 3prime end7
PositionCDS
2D Structure