Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TTACAGGCATAAGCAGCTGTGCCGGGTC
((((((((((...(((......&.)))..)))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001099850
GeneSymbolPRAMEF18
Binding site1695,1723
Score1.0
Seed1
Au0.559
Energy-17.9
Binding len17
Me-11.398
Phylopstem-0.37949291
Phylopflank-0.44722085999999994
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end2
Position3UTR
2D Structure