Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&CTATGTTGTCCAGGC
.(((((...(((((((((....&)))))))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001099850
GeneSymbolPRAMEF18
Binding site1622,1637
Score0.846
Seed0
Au0.574
Energy-16.3
Binding len15
Me-8.707
Phylopstem-0.41268122222222225
Phylopflank-0.5748620975
Longest consecutive pairings14
Position of longest consecutive pairings1
Pairings in 3prime end4
Position3UTR
2D Structure