Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCCTGCAGCCGGGGACTGTC
..((((((.((((((((.(((&))).)))))))).)).)))).
Details
MiRNAhsa-miR-5047
RefseqIDXM_047417030
GeneSymbolJADE2
Binding site2280,2301
Score0.846
Seed1
Au0.324
Energy-24.2
Binding len21
Me-6.013
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings8
Position of longest consecutive pairings9
Pairings in 3prime end7
PositionCDS
2D Structure