Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GAGTCTGCACAAGAGAAGCTGCTGGAGACCCTCTATGGCACTAAGAAGTCCTGTGTGCCGAGGTG
((((((((((((..........&.)))))))).)))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001100120
GeneSymbolECE2
Binding site1485,1550
Score0.846
Seed1
Au0.426
Energy-18.0
Binding len15
Me-7.052
Phylopstem3.085849215384615
Phylopflank3.9736023187500003
Longest consecutive pairings8
Position of longest consecutive pairings6
Pairings in 3prime end0
PositionCDS
2D Structure