Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GAGGGCTGCGTGCGCCGGGTG
(((((((.(((...((((....&.))))))).))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001100122
GeneSymbolSBNO2
Binding site3483,3504
Score0.923
Seed1
Au0.309
Energy-18.2
Binding len17
Me-11.744
Phylopstem3.358462285714286
Phylopflank4.6108885825
Longest consecutive pairings7
Position of longest consecutive pairings9
Pairings in 3prime end4
PositionCDS
2D Structure