Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TCTGTGGCTTAGAAATGTGCCAGTGT
(((((((.(.(((((((((...&.))))))))).).))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001100166
GeneSymbolPHACTR2
Binding site8298,8324
Score0.923
Seed1
Au0.647
Energy-23.6
Binding len21
Me-7.494
Phylopstem0.6686976888888889
Phylopflank0.32243971000000016
Longest consecutive pairings9
Position of longest consecutive pairings11
Pairings in 3prime end5
Position3UTR
2D Structure