Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&CTGCCCTGGGAAAGCATCCAGTGG
((((((...((((((((((((.&))))))..))))))...)))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001100167
GeneSymbolIRAG1
Binding site2955,2979
Score0.846
Seed0
Au0.5
Energy-25.4
Binding len24
Me-8.851
Phylopstem0.23705599285714277
Phylopflank0.32173014874999994
Longest consecutive pairings6
Position of longest consecutive pairings18
Pairings in 3prime end7
Position3UTR
2D Structure