Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GAAGTCCAAGCAGAAGACAATATCTACATTGAGAATAGTCTTTATGCCACGGA
.(((((((((((((((((((..&.))))))))))...........))))))).)).
Details
MiRNAhsa-miR-221-5p
RefseqIDXM_047417097
GeneSymbolHAVCR1
Binding site1099,1152
Score0.923
Seed1
Au0.588
Energy-21.7
Binding len33
Me-3.793
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings10
Position of longest consecutive pairings22
Pairings in 3prime end6
PositionCDS
2D Structure