Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&AGCTGGGGAGGAGCGGGC
..((.((((((((((((.(...&).)))))))))))).)).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001100176
GeneSymbolHOOK2
Binding site2127,2145
Score0.846
Seed0
Au0.294
Energy-22.6
Binding len18
Me-9.076
Phylopstem2.3527974916666667
Phylopflank2.8441573449999997
Longest consecutive pairings12
Position of longest consecutive pairings4
Pairings in 3prime end4
PositionCDS
2D Structure