Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTCAGCCAGCAGAAACCCACCCTACGACACTGCAGG
(((((((((((((((..((((&))))))))).)))).................)))))).
Details
MiRNAhsa-miR-5047
RefseqIDXM_047417097
GeneSymbolHAVCR1
Binding site753,791
Score0.923
Seed1
Au0.426
Energy-19.5
Binding len38
Me-4.171
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings9
Position of longest consecutive pairings29
Pairings in 3prime end6
PositionCDS
2D Structure