Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&CTGCCCTCAAGGAGCAACTGCCAGA
..((((((((((...((((((.&))))))..)))))......))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001100397
GeneSymbolRAPGEF4
Binding site1557,1582
Score0.846
Seed1
Au0.485
Energy-22.0
Binding len25
Me-7.838
Phylopstem3.6582941375
Phylopflank4.0535656499999995
Longest consecutive pairings6
Position of longest consecutive pairings19
Pairings in 3prime end6
PositionCDS
2D Structure