Details of Duplex


2D Structure dot-bracket from RNAduplex"
AGACCCTGCAGCCTTCCCACC&GGTTTCGGGAAGGTGTTGAGGAATCTA
(((.(((...(((((((((((&)))...))))))))....)))..))).
Details
MiRNAhsa-miR-4725-5p
RefseqIDNM_001100397
GeneSymbolRAPGEF4
Binding site3178,3205
Score0.923
Seed0
Au0.588
Energy-20.5
Binding len27
Me-11.582
Phylopstem0.46645457142857144
Phylopflank0.5796487175
Longest consecutive pairings8
Position of longest consecutive pairings13
Pairings in 3prime end8
Position3UTR
2D Structure