Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&CTCCCGGAGGAGCCT
....((((((..((((((.((.&)))))))))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001100399
GeneSymbolPDS5A
Binding site180,195
Score0.846
Seed0
Au0.324
Energy-22.6
Binding len15
Me-15.718
Phylopstem3.07466
Phylopflank3.1928642125
Longest consecutive pairings14
Position of longest consecutive pairings1
Pairings in 3prime end6
Position5UTR
2D Structure