Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&ACATTGCAATATATATTGAAATCTTCGGAGGCTGCCAGGTT
((((((((..(..((.((((((&.)))))).))..)..)))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001100409
GeneSymbolSENP6
Binding site5928,5969
Score0.885
Seed1
Au0.632
Energy-19.5
Binding len24
Me-11.105
Phylopstem-0.1075432375
Phylopflank0.12222223000000006
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end7
Position3UTR
2D Structure