Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TCACCCTCGGGGAGCAACATGGCAGATAATCTCAGTGA
((((((((((((...((((.((&))))))..))))))).................))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001100426
GeneSymbolRAP1GDS1
Binding site164,202
Score1.0
Seed1
Au0.515
Energy-19.8
Binding len38
Me-6.819
Phylopstem2.857453896551724
Phylopflank2.08249474425
Longest consecutive pairings7
Position of longest consecutive pairings23
Pairings in 3prime end6
Position5UTR
2D Structure