Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TCACCCTCGGGGAGCAACATGGATAATCTCAGTGA
((((((((((((...((((.((&))))))..)))))))..............))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001100427
GeneSymbolRAP1GDS1
Binding site164,199
Score1.0
Seed1
Au0.529
Energy-20.0
Binding len35
Me-6.819
Phylopstem2.619080884615385
Phylopflank2.08249474425
Longest consecutive pairings7
Position of longest consecutive pairings20
Pairings in 3prime end6
Position5UTR
2D Structure