Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TCTAGACTAAAGAAAGGAAAGCAGGTTATAAAAGCCATAGTAGCCAGTC
.(((((((((((((((..((((&))))..)...))))))))........................)))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001100428
GeneSymbolRAP1GDS1
Binding site2894,2943
Score0.846
Seed1
Au0.544
Energy-18.8
Binding len49
Me-3.793
Phylopstem1.0071336904761905
Phylopflank0.32824434125
Longest consecutive pairings8
Position of longest consecutive pairings31
Pairings in 3prime end6
Position3UTR
2D Structure