Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TCTACATGAAAGCTAGGA
.((((((.....(((((((...&)))))))....)))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001100595
GeneSymbolSKA2
Binding site1092,1110
Score0.846
Seed1
Au0.706
Energy-17.5
Binding len18
Me-14.577
Phylopstem1.9715385714285716
Phylopflank-0.029140225000000047
Longest consecutive pairings7
Position of longest consecutive pairings11
Pairings in 3prime end5
Position3UTR
2D Structure