Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TCCACCCAGAATGGAAGTGTGTCCTTACTGTAAGAAGCCAT
...(((((((.((((((((.((&)).)))))))).))).....................)))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001100622
GeneSymbolC17orf80
Binding site181,222
Score0.846
Seed0
Au0.588
Energy-20.7
Binding len41
Me-9.339
Phylopstem0.18553012500000002
Phylopflank1.3757164107500002
Longest consecutive pairings8
Position of longest consecutive pairings30
Pairings in 3prime end7
PositionCDS
2D Structure