Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&ATCCGGGAGAAGCACCCACAAAACTAGCATCCTCCTGGAGGAGCTCGGG
..((((((((..((((((..((&.))..))))))))))).))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001100622
GeneSymbolC17orf80
Binding site115,164
Score0.923
Seed1
Au0.5
Energy-20.4
Binding len21
Me-11.129
Phylopstem-0.4666091111111111
Phylopflank0.16488293900000006
Longest consecutive pairings11
Position of longest consecutive pairings5
Pairings in 3prime end6
Position5UTR
2D Structure