Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&GCCCGGATCGGGGAAGTGAAAGTGCCTCGGAGGAGGAGGGCCGGTC
.(((((((((((((((((((..&.)))))...)))))).)))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001100812
GeneSymbolCXCL16
Binding site108,154
Score0.923
Seed1
Au0.294
Energy-24.1
Binding len25
Me-3.793
Phylopstem-0.18009128695652174
Phylopflank-0.11162513125000002
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end6
Position5UTR
2D Structure