Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TGCAGAGAGGGGCCCTGGTCCTCATCCATGGAGAAGTGG
((((((((((((((((.(....&).))))))))))))....................)))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001100876
GeneSymbolPHYHD1
Binding site1540,1579
Score0.923
Seed1
Au0.441
Energy-23.1
Binding len39
Me-3.938
Phylopstem4.063709566666666
Phylopflank2.3675619525
Longest consecutive pairings12
Position of longest consecutive pairings25
Pairings in 3prime end3
PositionCDS
2D Structure