Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TCTGCCCAAGAAAGCGAAGGACAAGGACGTGGAGTCTAAGAGCCAGTGC
((((((((((((((((((((((&)))))))).))))).........................))))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001100913
GeneSymbolPACS2
Binding site2660,2709
Score0.846
Seed1
Au0.441
Energy-30.9
Binding len49
Me-3.938
Phylopstem4.219205516666668
Phylopflank5.049253900000001
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end8
PositionCDS
2D Structure