Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&GCTCAGCCCGGAGCCGGC
..((((((((...((((((...&))))))...)))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001101357
GeneSymbolCCDC160
Binding site35,53
Score0.846
Seed1
Au0.206
Energy-23.5
Binding len18
Me-12.418
Phylopstem0.1743459875
Phylopflank0.33443387713235284
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end5
Position5UTR
2D Structure