Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TCTCCCAGAGCCTGGAGTTCAACTCTCCTGCCGACAACTACACAGTGT
((((((((((.(((((((.(((&))))))))))...)))))........................))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001101372
GeneSymbolIGLON5
Binding site289,337
Score0.923
Seed1
Au0.426
Energy-22.4
Binding len48
Me-6.762
Phylopstem4.451528108823529
Phylopflank3.33169474375
Longest consecutive pairings10
Position of longest consecutive pairings38
Pairings in 3prime end7
PositionCDS
2D Structure