Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&ATGCCAGGTT
(((((((((.............&))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001101376
GeneSymbolFAM183A
Binding site238,248
Score1.0
Seed1
Au0.485
Energy-15.3
Binding len10
Me-14.466
Phylopstem2.111324555555555
Phylopflank1.72950315
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end0
PositionCDS
2D Structure