Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TGCAATGCATGCTGGGA
.((((((((.((.((((.....&)))).)).)))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001101387
GeneSymbolPIRT
Binding site997,1014
Score0.923
Seed1
Au0.485
Energy-15.7
Binding len17
Me-6.325
Phylopstem0.148312375
Phylopflank0.05313315499999999
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end3
Position3UTR
2D Structure