Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TACCTGTGAGGGAGCCAGC
..(((((((((((.((((((..&)))))).))))))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001101387
GeneSymbolPIRT
Binding site2255,2274
Score0.846
Seed1
Au0.412
Energy-26.7
Binding len19
Me-5.814
Phylopstem-0.575776790909091
Phylopflank0.3582183674999999
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end6
Position3UTR
2D Structure