Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TCACCCAGGATGGCCATAGCCTTCATGGAGACCCATGCCAGTGT
(((((((.((.((((((((.((&)))))))))).)).......................))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001101387
GeneSymbolPIRT
Binding site2584,2628
Score0.923
Seed1
Au0.426
Energy-23.7
Binding len44
Me-9.076
Phylopstem0.256308875
Phylopflank-0.14189122624999995
Longest consecutive pairings10
Position of longest consecutive pairings34
Pairings in 3prime end7
Position3UTR
2D Structure