Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TCTGCCCAGGAGATTGTAGCCTGGG
..(((((((.((((((((((((&))))))))))))...).)))).)).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001101387
GeneSymbolPIRT
Binding site2891,2916
Score0.923
Seed1
Au0.441
Energy-23.3
Binding len25
Me-6.2
Phylopstem3.294709166666667
Phylopflank1.6554477775
Longest consecutive pairings12
Position of longest consecutive pairings13
Pairings in 3prime end8
Position3UTR
2D Structure