Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&CTATTCCAGCTGGAGCCGAGTGA
((((((((((...((((((((.&)))).))))..)))))).)))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001101648
GeneSymbolNPC1L1
Binding site2029,2052
Score0.923
Seed1
Au0.338
Energy-25.0
Binding len23
Me-11.398
Phylopstem4.539260636363636
Phylopflank2.2810603250000003
Longest consecutive pairings6
Position of longest consecutive pairings6
Pairings in 3prime end7
PositionCDS
2D Structure