Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&GCCCGGACCCCTTACACCCTGCATTCCAGATGGGGGAGCCGCCCGGTGC
(((((((((((((((((((((.&.))))...)))))..))))))))....)))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001101654
GeneSymbolCXXC1
Binding site2094,2143
Score0.923
Seed1
Au0.382
Energy-25.7
Binding len32
Me-3.938
Phylopstem4.877847433333334
Phylopflank3.6021068874999997
Longest consecutive pairings8
Position of longest consecutive pairings9
Pairings in 3prime end7
Position3UTR
2D Structure