Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TGTGCCAGGTG
((((((((((............&)))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001101677
GeneSymbolSOHLH1
Binding site639,650
Score1.0
Seed1
Au0.353
Energy-17.0
Binding len11
Me-13.224
Phylopstem-0.33353041
Phylopflank-0.5088275675
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end0
PositionCDS
2D Structure