Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TCCGGCTCAGGAAGGAGCTC
....(((((((((((((((.((&))..))))))))))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001102402
GeneSymbolPCTP
Binding site301,321
Score0.923
Seed0
Au0.309
Energy-25.3
Binding len20
Me-9.547
Phylopstem-0.22059393333333338
Phylopflank-0.6546765137500001
Longest consecutive pairings15
Position of longest consecutive pairings1
Pairings in 3prime end7
Position5UTR
2D Structure