Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TACCCAGTTTGCACCCAGGATGAGGGAACGCATTCAAAAGTGAAATGTAAAGCCAGTGC
(((((((((((((((((((...&.))))))))..))).........................)))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001102575
GeneSymbolSNX18
Binding site4701,4760
Score0.904
Seed1
Au0.632
Energy-24.9
Binding len48
Me-3.938
Phylopstem0.24367923347826081
Phylopflank-0.09834195375000002
Longest consecutive pairings8
Position of longest consecutive pairings39
Pairings in 3prime end5
Position3UTR
2D Structure