Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTTTAATTGCTGGCATGTAC
.((((((((((((((.(((((&)))))))))))).))).)))).
Details
MiRNAhsa-miR-5047
RefseqIDXM_047417248
GeneSymbolPAM
Binding site430,452
Score0.846
Seed1
Au0.529
Energy-17.5
Binding len22
Me-4.026
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings12
Position of longest consecutive pairings10
Pairings in 3prime end7
PositionCDS
2D Structure