Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TCTGCATCAGAAATGCCAGA
..(((((((...(((((((...&))))))).....))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001102599
GeneSymbolCEACAM20
Binding site1292,1312
Score0.846
Seed1
Au0.5
Energy-17.9
Binding len20
Me-12.371
Phylopstem-0.014071857142857145
Phylopflank0.07633324999999996
Longest consecutive pairings7
Position of longest consecutive pairings13
Pairings in 3prime end5
PositionCDS
2D Structure