Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TCTGCATCACCCAGGAAGTGATGGCCTGTGG
(((.(((((((((((((((.((&.)))))))))))).))..))).))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001102605
GeneSymbolIMPDH1
Binding site1294,1325
Score0.923
Seed0
Au0.368
Energy-25.7
Binding len26
Me-6.97
Phylopstem5.351923166666667
Phylopflank5.6316414525
Longest consecutive pairings12
Position of longest consecutive pairings13
Pairings in 3prime end7
PositionCDS
2D Structure